BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A08LP1|AL429150
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1152 1565 0.0
>3x_Contig1152
Length = 5366
Score = 1565 bits (785), Expect = 0.0
Identities = 822/838 (98%)
Strand = Plus / Minus
Query: 25 aagaccttaggatatatccgctcttacttgaaccaagaatttgtgccagacgctctaggt 84
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5366 aagaccttaggatatatccgctcttacttgaaccaagaatttgtgcaagacgctctaggt 5307
Query: 85 acgaaagtgagcccgtataacggatgtyatacttcagttgggagcgacttcttcctgacg 144
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5306 acgaaagtgagctcgtataacggatgtaatacttcagttgggagcgacttcttcctgacg 5247
Query: 145 ggtgataatagcaggccattccagccatatgtgaccgaactgcttgatttgaacattcct 204
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5246 ggtgataatagcaggccattccagcaatatgtgaccgaactgcttgatttgaacattcct 5187
Query: 205 gtcttgatatatgccggcgatacagactacatatgtyattggttgggtaatatggcgtgg 264
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5186 gtcttgatatatgccggcgatacagactacatatgtaattggttgggtaatatggcgtgg 5127
Query: 265 accgatgctctcacatggaaggaccatataagccatgamacgttacccttaaacccatgg 324
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 5126 accgatgctctcacatggaaggaccatataagctatgaaacgttacccttaaacccatgg 5067
Query: 325 tatagtttgaacggatccgtccagtttggtgaggtcaaaaaccacggaccctttactttc 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5066 tatagtttgaacggatccgtccagtttggtgaggtcaaaaaccacggaccctttactttc 5007
Query: 385 ctcagagtattcgaagcaggtcatacggttccatattatcaaccactagctactatggaa 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5006 ctcagagtattcgaagcaggtcatacggttccatattatcaaccactagctactatggaa 4947
Query: 445 atgatcaacagatggatctcgggggacctttctttaggctactctaactaaatatgctat 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4946 atgatcaacagatggatctcgggggacctttctttaggctactctaactaaatatgctat 4887
Query: 505 tatmatgtcaaacactttcacgatgatatatacacagaacgtatgtctatcagccgaaca 564
||| |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||
Sbjct: 4886 tataatgtcaaacactttcacgatgatatatacacagaacgtatgtatataagcagaaca 4827
Query: 565 tgcggaaggtcgttattctcatttagccctttgccaactatgtngaggctttctcagaaa 624
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 4826 tgcggaaggtcgttattctcatttagccctttgcaaactatgtagaggctttctcagaaa 4767
Query: 625 aactagacttgataatatctattcatacacggccattcaaacgaattgatcttcttagac 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4766 aactagacttgataatatctattcatacacggccattcaaacgaattgatcttcttagac 4707
Query: 685 cttctcctaagattactaccttgtcttcttgttgcaatcttgtcaaagcgtttgataatt 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4706 cttctcctaagattactaccttgtcttcttgttgcaatcttgtcaaagcgtttgataatt 4647
Query: 745 cgatactctccactttatcttgcgattgttcgtttataagcytgcytagttcgttgaaac 804
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 4646 cgatactctccactttatcttgcgattgttcgtttataagcttgcttagttcgttgaaac 4587
Query: 805 ttattgtgtctgttgtcctttctgtcaatatctttaaaatttctctcgccmagtcttc 862
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4586 ttattgtgtctgttgtcctttctgtcaatatctttaaaatttctctcgccaagtcttc 4529
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4653
Number of Sequences: 1807
Number of extensions: 4653
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)